Information Index on Size
Descriptor Category : topological
c++ entity: functor
Description
The atom number (A) is the simplest molecular descriptor: counts the number
of atoms in a molecule. Usually H atoms are not counted.
The information index on size is calculated as : Isize = A * log2(A).
Prototype
template <class Molecule>
struct information_index_on_size : std::unary_function<Molecule,
typename Molecule::calc_type> {
result_type operator() (typename boost::call_traits<argument_type>::param_type m);
};
Where defined
morpho/cdl/descriptors/topological.hpp
Namespace
morpho::cdl
Inherits from
std::unary_function<Molecule,typename Molecule::calc_type>
Arguments
| Argument | Model of |
| Molecule |
cdl::molecule |
Example
// suppose you're streaming a mol format from the stdin:
typedef desc_molecular_properties<> desc_mol_props_t;
typedef boost::property<mol_propsS, molecular_properties<>,
boost::property<descriptors_mol_propsS, desc_mol_props_t> > descr_props_t;
typedef molecule<double,descr_props_t> M;
morpho::cdl::nail_juice<M> j;
morpho::cdl::get_juice_from_stream(std::cin, j, 0, sdf_formatT());
M mol(j);
morpho::cdl::information_index_on_size<M> IIOS;
std::cout << "Information index on size of my mol: ";
std::cout << IIOS(mol) << '\n';
Related Items
total information index on atomic composition
Information indices
References
- Todeschini, R.; Consonni, V. "Handbook of Molecular Descriptors". Wiley-VCH,
Methods and Principles in Medicinal Chemistry. Volume 11. 2000.
Copyright (c) Vladimir Josef Sykora and Morphochem AG 2003